Will it be a problem in H1B?

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[Prakhar Kapoor]

I started with MS in Computer Science in fall 2012. I am doing my CPT with a Computer Science firm but I wish to change my stream to Innovation Technology and Entrepreneurship. I wish to know can the firm I am doing CPT do my H1B for software developer position? Innovation technology and Entrepreneurship has courses from Computer Science as well in their curriculum. Will it be a problem in H1B if I want position as a software developer with MS in ITE? Please reply
Thanks!!!